ImmGen 3.2.0

Christophe Benoist ❘ Freeware ❘
iOS
out of 13 votes

Explore gene expression levels in different mouse and human immune system cells. Begin by entering a gene name (or alias) in the search bar to access a list of hits to navigate through.

When searching, you will encounter a "heatmap barcode" illustrating the expression level of the gene across various immune system cell lineages (such as B cells, T cells, Myeloid cells, etc). There are three datasets available for comparison: mouse RNA-seq, mouse microarray, and human RNA-seq.

By selecting a cell lineage icon, you can visualize the expression data in a bar chart format. Use the settings menu in the top right corner to switch between a logarithmic and linear axis. Note that in the microarray data, low expression values are partially obscured.

On the main "heatmap barcode" screen, pressing the "Show related genes" button will reveal a "gene constellation" view displaying the most correlated genes within specific population groups. By default, correlations are shown concerning key populations that span the entire immune system.

For feedback or feature requests, please contact [email protected].

The data is sourced from the Immunological Genome Project, an international consortium funded by the National Institutes of Health (NIAID).

Overview

ImmGen is a Freeware software in the category Home & Hobby developed by Christophe Benoist.

The latest version of ImmGen is 3.2.0, released on 05/16/2024. It was initially added to our database on 05/16/2024.

ImmGen runs on the following operating systems: iOS.

Users of ImmGen gave it a rating of 5 out of 5 stars.

FAQ

What is ImmGen?

ImmGen is a project aimed at characterizing the immune system's cell types through comprehensive gene expression analysis.

Who is Christophe Benoist?

Christophe Benoist is a prominent immunologist known for his work in the field of immunology, particularly in the study of T cells and autoimmune diseases.

What are the key features of ImmGen?

ImmGen provides data and resources related to immune system cell types, including gene expression profiles, pathways, and functional annotations.

How can I access ImmGen data?

ImmGen data can be accessed online through their official website, where researchers can download datasets and utilize analysis tools.

What types of research can benefit from ImmGen?

Research involving immunology, autoimmunity, infectious diseases, and cancer can significantly benefit from ImmGen's comprehensive datasets.

Is there any cost associated with using ImmGen?

No, ImmGen data and resources are freely available to the scientific community.

How frequently is ImmGen updated?

ImmGen is continually updated as new research findings emerge and additional datasets are generated.

Are there publications related to ImmGen?

Yes, many scientific papers have been published based on findings from the ImmGen project; a list can be found on their website.

Does ImmGen offer tools for data analysis?

Yes, ImmGen provides various tools that researchers can use for analyzing and interpreting gene expression data.

Can I submit my own data to ImmGen?

Currently, ImmGen does not accept external submissions; it primarily focuses on its own comprehensive datasets.

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